Publications

Found 164 results
2014
Mondal J., Choi E., Yethiraj A..  2014.  Atomistic Simulations of Poly(ethylene oxide) in Water and an Ionic Liquid at Room Temperature. MacromoleculesMacromolecules. 47:438-446.
Choi E., Mondal J., Yethiraj A..  2014.  Coarse-Grained Models for Aqueous Polyethylene Glycol Solutions. Journal of Physical Chemistry BJournal of Physical Chemistry B. 118:323-329.
Kwon G., Sung B.J, Yethiraj A..  2014.  Dynamics in Crowded Environments: Is Non-Gaussian Brownian Diffusion Normal? Journal of Physical Chemistry BJournal of Physical Chemistry B. 118:8128-8134.
Zhang L.L, Yethiraj A., Cui Q..  2014.  Free Energy Calculations for the Peripheral Binding of Proteins/Peptides to an Anionic Membrane. 1. Implicit Membrane Models. Journal of Chemical Theory and ComputationJournal of Chemical Theory and Computation. 10:2845-2859.
2013
Sung B.J, Yethiraj A..  2013.  Dynamics of two-dimensional and quasi-two-dimensional polymers. Journal of Chemical PhysicsJournal of Chemical Physics. 138
Yethiraj A., Striolo A..  2013.  Fracking: What Can Physical Chemistry Offer? Journal of Physical Chemistry LettersJournal of Physical Chemistry Letters. 4:687-690.
Cui Q., Zhang L.L, Wu Z., Yethiraj A..  2013.  Generation and sensing of membrane curvature: Where materials science and biophysics meet. Current Opinion in Solid State & Materials ScienceCurrent Opinion in Solid State & Materials Science. 17:164-174.
Mondal J., Mahanthappa M., Yethiraj A..  2013.  Self-Assembly of Gemini Surfactants: A Computer Simulation Study. Journal of Physical Chemistry BJournal of Physical Chemistry B. 117:4254-4262.
Wu Z., Cui Q., Yethiraj A..  2013.  Why Do Arginine and Lysine Organize Lipids Differently? Insights from Coarse-Grained and Atomistic Simulations Journal of Physical Chemistry BJournal of Physical Chemistry B. 117:12145-12156.
2012
Park S., Zhu X., Yethiraj A..  2012.  Atomistic Simulations of Dilute Polyelectrolyte Solutions. Journal of Physical Chemistry BJournal of Physical Chemistry B. 116:4319-4327.
Cho H.W, Kwon G., Sung B.J, Yethiraj A..  2012.  Effect of Polydispersity on Diffusion in Random Obstacle Matrices. Physical Review LettersPhysical Review Letters. 109
Mondal J., Yethiraj A..  2012.  Effect of secondary structure on the self-assembly of amphiphilic molecules: A multiscale simulation study. Journal of Chemical PhysicsJournal of Chemical Physics. 136
Kim J.S, Wu Z., Morrow A.R, Yethiraj A., Yethiraj A..  2012.  Self-Diffusion and Viscosity in Electrolyte Solutions. Journal of Physical Chemistry BJournal of Physical Chemistry B. 116:12007-12013.
2011
Kim JSoo, Yethiraj A..  2011.  Crowding Effects on Protein Association: Effect of Interactions between Crowding Agents. Journal of Physical Chemistry BJournal of Physical Chemistry B. 115:347-353.
Mondal J, Yethiraj A..  2011.  Driving Force for the Association of Amphiphilic Molecules. Journal of Physical Chemistry LettersJournal of Physical Chemistry Letters. 2:2391-2395.
Wu Z, Cui Q., Yethiraj A..  2011.  Driving Force for the Association of Hydrophobic Peptides: The Importance of Electrostatic Interactions in Coarse-Grained Water Models. Journal of Physical Chemistry LettersJournal of Physical Chemistry Letters. 2:1794-1798.
Mondal J, Bratton BP, Li Y, Yethiraj A., Weisshaar J.C.  2011.  Entropy-Based Mechanism of Ribosome-Nucleoid Segregation in E. coli Cells. Biophysical JournalBiophysical Journal. 100:2605-2613.
Jung HTae, Sung BJune, Yethiraj A..  2011.  The Influence of the Polymer Chain Stiffness on Tracer Diffusion in Polymeric Matrices. Journal of Polymer Science Part B-Polymer PhysicsJournal of Polymer Science Part B-Polymer Physics. 49:818-825.
Wu Z, Cui Q., Yethiraj A..  2011.  A New Coarse-Grained Force Field for Membrane-Peptide Simulations. Journal of Chemical Theory and ComputationJournal of Chemical Theory and Computation. 7:3793-3802.
Frischknecht AL, Yethiraj A..  2011.  Two- and three-body interactions among nanoparticles in a polymer melt. Journal of Chemical PhysicsJournal of Chemical Physics. 134
2010
Kim JSoo, Yethiraj A..  2010.  Crowding Effects on Association Reactions at Membranes. Biophysical JournalBiophysical Journal. 98:951-958.
Zhu X, Koenig P, Hoffmann M, Yethiraj A., Cui Q..  2010.  Establishing Effective Simulation Protocols for beta- and alpha/beta-Peptides. III. Molecular Mechanical Model for Acyclic beta-Amino Acids. Journal of Computational ChemistryJournal of Computational Chemistry. 31:2063-2077.
Wu Z, Cui Q., Yethiraj A..  2010.  A New Coarse-Grained Model for Water: The Importance of Electrostatic Interactions. Journal of Physical Chemistry BJournal of Physical Chemistry B. 114:10524-10529.
Mondal J, Zhu X, Cui Q., Yethiraj A..  2010.  Self-Assembly of beta-Peptides: Insight from the Pair and Many-Body Free Energy of Association. Journal of Physical Chemistry CJournal of Physical Chemistry C. 114:13551-13556.
Mondal J, Sung BJune, Yethiraj A..  2010.  Sequence dependent self-assembly of beta-peptides: Insights from a coarse-grained model. Journal of Chemical PhysicsJournal of Chemical Physics. 132

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